Driver Side Power Window Auto Up / Down Function does not Operate with Power Window Master Switch: Description
WARNING: This page is about a different car, the 2010 Lexus GS 450h. However, it is still accessible from the selected car via links, so may be relevant.
If the manual UP / DOWN function can be performed but the AUTO UP / DOWN function cannot, then the fail-safe may be functioning.
If the power window initialization. Refer to INITIALIZATION has not been performed, the AUTO UP / DOWN function will not operate.
NOTE:
When the power window regulator motor assembly (on the driver side) is reinstalled or replaced, the power window control system must be initialized.